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Clean up file paths for new module hierarchy

Takenobu Tani requested to merge takenobu-hs/ghc:wip/fix-comment-path into master

This updates comments only.

This patch replaces file references according to new module hierarchy [1][2].

For files under the compiler/ directory, I replace them as module paths instead of file paths. For instance, GHC.Unit.State instead of compiler/GHC/Unit/State.hs [3].

For current and future haddock's markup, this patch encloses the module name with "" [4].

Edited by Takenobu Tani

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