Commit 8122aacc authored by thoughtpolice's avatar thoughtpolice

Also fix reverse-compliment and k-nucleotide.

Signed-off-by: thoughtpolice's avatarAustin Seipp <aseipp@pobox.com>
parent e4bfef75
......@@ -14,8 +14,8 @@ HC_OPTS += -O2 -XBangPatterns -package bytestring
#------------------------------------------------------------------
# Create input
fasta-c : ../fasta/fasta-c.o
gcc $< -o $@
fasta-c : ../fasta/fasta-c.c
$(CC) -std=gnu99 -march=native -O3 -fomit-frame-pointer $< -o $@
knucleotide-input250000.txt : fasta-c
./fasta-c $(FAST_OPTS) > $@
......
......@@ -19,8 +19,8 @@ HC_OPTS += -O2 -XBangPatterns -funfolding-use-threshold=32 -XMagicHash \
#------------------------------------------------------------------
# Create input
fasta-c : ../fasta/fasta-c.o
gcc $< -o $@
fasta-c : ../fasta/fasta-c.c
$(CC) -std=gnu99 -march=native -O3 -fomit-frame-pointer $< -o $@
revcomp-input250000.txt : fasta-c
./fasta-c $(FAST_OPTS) > $@
......
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